Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSF1RP07333 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CSF1RP07333 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSF1RP07333 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.57■■□□□ 1.04
CSF1RP07333 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
CSF1RP07333 AC012317.2-201ENST00000623305 2251 ntBASIC21.57■■□□□ 1.04
CSF1RP07333 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSF1RP07333 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CSF1RP07333 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CSF1RP07333 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.56■■□□□ 1.04
CSF1RP07333 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CSF1RP07333 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CSF1RP07333 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 IGLL3P-201ENST00000412472 434 ntBASIC21.56■■□□□ 1.04
CSF1RP07333 AC023274.1-201ENST00000418278 595 ntBASIC21.56■■□□□ 1.04
CSF1RP07333 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CSF1RP07333 AC112482.1-201ENST00000492080 688 ntBASIC21.56■■□□□ 1.04
CSF1RP07333 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.56■■□□□ 1.04
CSF1RP07333 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.56■■□□□ 1.04
CSF1RP07333 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.56■■□□□ 1.04
CSF1RP07333 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.56■■□□□ 1.04
CSF1RP07333 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.56■■□□□ 1.04
CSF1RP07333 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.56■■□□□ 1.04
CSF1RP07333 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.56■■□□□ 1.04
CSF1RP07333 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSF1RP07333 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CSF1RP07333 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.55■■□□□ 1.04
CSF1RP07333 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 GPX1P2-201ENST00000429271 606 ntBASIC21.55■■□□□ 1.04
CSF1RP07333 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.55■■□□□ 1.04
CSF1RP07333 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.55■■□□□ 1.04
CSF1RP07333 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.55■■□□□ 1.04
CSF1RP07333 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CSF1RP07333 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.55■■□□□ 1.04
CSF1RP07333 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.55■■□□□ 1.04
CSF1RP07333 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSF1RP07333 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.54■■□□□ 1.04
CSF1RP07333 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CSF1RP07333 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 MIR1233-2-201ENST00000408138 82 ntBASIC21.54■■□□□ 1.04
CSF1RP07333 MIR1233-1-201ENST00000408722 82 ntBASIC21.54■■□□□ 1.04
CSF1RP07333 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.54■■□□□ 1.04
CSF1RP07333 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.54■■□□□ 1.04
CSF1RP07333 GGTLC5P-201ENST00000617623 998 ntBASIC21.54■■□□□ 1.04
CSF1RP07333 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CSF1RP07333 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CSF1RP07333 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSF1RP07333 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CSF1RP07333 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSF1RP07333 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.53■■□□□ 1.04
CSF1RP07333 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
CSF1RP07333 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.53■■□□□ 1.04
CSF1RP07333 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.53■■□□□ 1.04
CSF1RP07333 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSF1RP07333 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.53■■□□□ 1.04
CSF1RP07333 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms