Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 FOSL1P1-201ENST00000511041 816 ntBASIC17.85■□□□□ 0.45
HLA-DQB2P05538 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 MIR3652-201ENST00000579335 131 ntBASIC17.85■□□□□ 0.45
HLA-DQB2P05538 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 AL645608.8-201ENST00000606034 2086 ntBASIC17.85■□□□□ 0.45
HLA-DQB2P05538 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 AC090340.1-201ENST00000620778 4980 ntBASIC17.85■□□□□ 0.45
HLA-DQB2P05538 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DQB2P05538 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 AL353593.2-201ENST00000602529 1483 ntBASIC17.84■□□□□ 0.45
HLA-DQB2P05538 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 IGHV3-52-201ENST00000519770 353 ntBASIC17.84■□□□□ 0.45
HLA-DQB2P05538 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DQB2P05538 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HLA-DQB2P05538 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 AC111152.3-201ENST00000569699 673 ntBASIC17.83■□□□□ 0.44
HLA-DQB2P05538 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 AD001527.2-201ENST00000622994 785 ntBASIC17.83■□□□□ 0.44
HLA-DQB2P05538 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.83■□□□□ 0.44
HLA-DQB2P05538 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB2P05538 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms