Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 AC010203.1-204ENST00000548782 407 ntBASIC15.86■□□□□ 0.13
HLA-DPB1P04440 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 AC009065.1-201ENST00000564055 1225 ntBASIC15.86■□□□□ 0.13
HLA-DPB1P04440 WWOX-216ENST00000569818 525 ntBASIC15.86■□□□□ 0.13
HLA-DPB1P04440 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 LINC01023-201ENST00000606054 436 ntBASIC15.86■□□□□ 0.13
HLA-DPB1P04440 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 UBALD1-205ENST00000590891 2641 ntBASIC15.86■□□□□ 0.13
HLA-DPB1P04440 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 PCDHB19P-201ENST00000570871 2371 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 LIN28AP1-201ENST00000429574 405 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AC009947.2-201ENST00000444014 672 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 AC005363.2-201ENST00000618631 242 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 HOXB1-202ENST00000577092 1414 ntBASIC15.85■□□□□ 0.13
HLA-DPB1P04440 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DPB1P04440 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AL139384.1-201ENST00000612143 3047 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 KRT18P23-201ENST00000435622 1283 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 ATP5G1P1-201ENST00000448724 379 ntBASIC15.84■□□□□ 0.13
HLA-DPB1P04440 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPB1P04440 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms