Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND1P03886 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND1P03886 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND1P03886 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.65■□□□□ 0.26
MT-ND1P03886 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND1P03886 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 C2orf69P3-201ENST00000565542 1120 ntBASIC16.65■□□□□ 0.26
MT-ND1P03886 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MT-ND1P03886 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND1P03886 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND1P03886 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND1P03886 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-ND1P03886 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MT-ND1P03886 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.64■□□□□ 0.26
MT-ND1P03886 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-ND1P03886 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 MIR1238-201ENST00000408483 83 ntBASIC16.64■□□□□ 0.25
MT-ND1P03886 AC007663.1-201ENST00000438948 1240 ntBASIC16.64■□□□□ 0.25
MT-ND1P03886 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-ND1P03886 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MT-ND1P03886 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-ND1P03886 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 DOC2GP-204ENST00000639052 2548 ntBASIC16.64■□□□□ 0.25
MT-ND1P03886 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MT-ND1P03886 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND1P03886 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND1P03886 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
MT-ND1P03886 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
MT-ND1P03886 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MT-ND1P03886 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.63■□□□□ 0.25
MT-ND1P03886 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.63■□□□□ 0.25
MT-ND1P03886 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 SNORA78-201ENST00000459373 127 ntBASIC16.63■□□□□ 0.25
MT-ND1P03886 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.63■□□□□ 0.25
MT-ND1P03886 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 AC104390.1-201ENST00000555663 520 ntBASIC16.63■□□□□ 0.25
MT-ND1P03886 AC009065.1-201ENST00000564055 1225 ntBASIC16.63■□□□□ 0.25
MT-ND1P03886 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 AC010653.2-201ENST00000623505 997 ntBASIC16.63■□□□□ 0.25
MT-ND1P03886 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms