Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.74■□□□□ 0.75
GGPS1O95749 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GGPS1O95749 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 AL591424.1-201ENST00000442569 1213 ntBASIC19.74■□□□□ 0.75
GGPS1O95749 AC009947.1-201ENST00000444350 727 ntBASIC19.74■□□□□ 0.75
GGPS1O95749 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
GGPS1O95749 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 AC139530.3-201ENST00000620344 690 ntBASIC19.74■□□□□ 0.75
GGPS1O95749 AC005593.1-201ENST00000624894 515 ntBASIC19.74■□□□□ 0.75
GGPS1O95749 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GGPS1O95749 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 ABALON-201ENST00000629058 1903 ntBASIC19.74■□□□□ 0.75
GGPS1O95749 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
GGPS1O95749 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GGPS1O95749 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.74■□□□□ 0.75
GGPS1O95749 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.74■□□□□ 0.75
GGPS1O95749 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GGPS1O95749 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.73■□□□□ 0.75
GGPS1O95749 BX842568.4-201ENST00000421222 227 ntBASIC19.73■□□□□ 0.75
GGPS1O95749 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 KRT18P3-201ENST00000451602 1288 ntBASIC19.73■□□□□ 0.75
GGPS1O95749 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
GGPS1O95749 SIGLEC30P-201ENST00000455569 941 ntBASIC19.73■□□□□ 0.75
GGPS1O95749 AC136632.2-201ENST00000512891 861 ntBASIC19.73■□□□□ 0.75
GGPS1O95749 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.73■□□□□ 0.75
GGPS1O95749 STK25P1-201ENST00000585406 838 ntBASIC19.73■□□□□ 0.75
GGPS1O95749 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GGPS1O95749 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
GGPS1O95749 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GGPS1O95749 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 FLJ13224-201ENST00000313737 1514 ntBASIC19.72■□□□□ 0.75
GGPS1O95749 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.72■□□□□ 0.75
GGPS1O95749 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GGPS1O95749 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GGPS1O95749 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.72■□□□□ 0.75
GGPS1O95749 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 IGHV3-52-201ENST00000519770 353 ntBASIC19.72■□□□□ 0.75
GGPS1O95749 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.72■□□□□ 0.75
GGPS1O95749 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.72■□□□□ 0.75
GGPS1O95749 AC004706.3-202ENST00000621574 984 ntBASIC19.72■□□□□ 0.75
GGPS1O95749 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.72■□□□□ 0.75
GGPS1O95749 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms