Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.6■□□□□ 0.41
CBX6O95503 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 SLC25A1P2-201ENST00000430693 912 ntBASIC17.6■□□□□ 0.41
CBX6O95503 AC008040.2-201ENST00000461049 708 ntBASIC17.6■□□□□ 0.41
CBX6O95503 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.6■□□□□ 0.41
CBX6O95503 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.6■□□□□ 0.41
CBX6O95503 AC010653.2-201ENST00000623505 997 ntBASIC17.6■□□□□ 0.41
CBX6O95503 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CBX6O95503 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.6■□□□□ 0.41
CBX6O95503 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CBX6O95503 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.6■□□□□ 0.41
CBX6O95503 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.6■□□□□ 0.41
CBX6O95503 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX6O95503 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CBX6O95503 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CBX6O95503 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 SDHAP2-201ENST00000455183 2001 ntBASIC17.59■□□□□ 0.41
CBX6O95503 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
CBX6O95503 AL109659.2-201ENST00000606809 1674 ntBASIC17.59■□□□□ 0.41
CBX6O95503 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 PCED1CP-201ENST00000419887 785 ntBASIC17.59■□□□□ 0.41
CBX6O95503 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 FAM207BP-201ENST00000447172 505 ntBASIC17.59■□□□□ 0.41
CBX6O95503 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.59■□□□□ 0.41
CBX6O95503 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.59■□□□□ 0.41
CBX6O95503 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX6O95503 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX6O95503 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.58■□□□□ 0.41
CBX6O95503 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX6O95503 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX6O95503 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.41
CBX6O95503 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
CBX6O95503 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.58■□□□□ 0.41
CBX6O95503 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CBX6O95503 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX6O95503 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX6O95503 KRT8P50-201ENST00000562022 1438 ntBASIC17.58■□□□□ 0.41
CBX6O95503 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 AC096733.2-201ENST00000609937 1394 ntBASIC17.58■□□□□ 0.4
CBX6O95503 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 AC004951.3-201ENST00000418645 1148 ntBASIC17.58■□□□□ 0.4
CBX6O95503 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 AC007663.1-201ENST00000438948 1240 ntBASIC17.58■□□□□ 0.4
CBX6O95503 MFAP1P1-201ENST00000442257 1255 ntBASIC17.58■□□□□ 0.4
CBX6O95503 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 FAM86EP-206ENST00000510506 987 ntBASIC17.58■□□□□ 0.4
CBX6O95503 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.58■□□□□ 0.4
CBX6O95503 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CBX6O95503 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 AL121956.5-201ENST00000625261 221 ntBASIC17.58■□□□□ 0.4
CBX6O95503 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.58■□□□□ 0.4
CBX6O95503 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.58■□□□□ 0.4
CBX6O95503 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX6O95503 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX6O95503 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms