Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
RFPL1O75677 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFPL1O75677 AC026396.1-201ENST00000419388 421 ntBASIC17.69■□□□□ 0.42
RFPL1O75677 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.69■□□□□ 0.42
RFPL1O75677 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RFPL1O75677 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.69■□□□□ 0.42
RFPL1O75677 AC083849.1-201ENST00000615227 514 ntBASIC17.69■□□□□ 0.42
RFPL1O75677 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 AGGF1P2-201ENST00000426656 2106 ntBASIC17.69■□□□□ 0.42
RFPL1O75677 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RFPL1O75677 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.69■□□□□ 0.42
RFPL1O75677 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RFPL1O75677 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
RFPL1O75677 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.68■□□□□ 0.42
RFPL1O75677 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.68■□□□□ 0.42
RFPL1O75677 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 LINC01311-201ENST00000565162 1445 ntBASIC17.68■□□□□ 0.42
RFPL1O75677 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.68■□□□□ 0.42
RFPL1O75677 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RFPL1O75677 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFPL1O75677 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RFPL1O75677 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RFPL1O75677 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 LYSMD4-203ENST00000378904 2122 ntBASIC17.67■□□□□ 0.42
RFPL1O75677 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.67■□□□□ 0.42
RFPL1O75677 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RFPL1O75677 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.67■□□□□ 0.42
RFPL1O75677 GCSHP2-201ENST00000560971 527 ntBASIC17.67■□□□□ 0.42
RFPL1O75677 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
RFPL1O75677 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.67■□□□□ 0.42
RFPL1O75677 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.67■□□□□ 0.42
RFPL1O75677 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.67■□□□□ 0.42
RFPL1O75677 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RFPL1O75677 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFPL1O75677 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.67■□□□□ 0.42
RFPL1O75677 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFPL1O75677 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFPL1O75677 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFPL1O75677 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFPL1O75677 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms