Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GPC4O75487 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC4O75487 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC4O75487 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC4O75487 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC4O75487 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC4O75487 AC011498.5-201ENST00000592027 486 ntBASIC17.69■□□□□ 0.42
GPC4O75487 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.69■□□□□ 0.42
GPC4O75487 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC4O75487 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC4O75487 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GPC4O75487 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC4O75487 AC009154.2-201ENST00000621177 724 ntBASIC17.68■□□□□ 0.42
GPC4O75487 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC4O75487 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GPC4O75487 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC4O75487 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
GPC4O75487 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC4O75487 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
GPC4O75487 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GPC4O75487 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
GPC4O75487 AC106820.2-201ENST00000563775 3264 ntBASIC17.67■□□□□ 0.42
GPC4O75487 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GPC4O75487 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC4O75487 PCED1CP-201ENST00000419887 785 ntBASIC17.67■□□□□ 0.42
GPC4O75487 TSPY12P-201ENST00000421279 868 ntBASIC17.67■□□□□ 0.42
GPC4O75487 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC4O75487 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC4O75487 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.67■□□□□ 0.42
GPC4O75487 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC4O75487 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 AL645608.8-201ENST00000606034 2086 ntBASIC17.67■□□□□ 0.42
GPC4O75487 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC4O75487 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC4O75487 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC4O75487 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC4O75487 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC4O75487 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC4O75487 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms