Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL691432.3-201ENST00000621860 400 ntBASIC17.13■□□□□ 0.33
CNOT3O75175 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT3O75175 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT3O75175 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
CNOT3O75175 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.13■□□□□ 0.33
CNOT3O75175 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 AC104819.1-201ENST00000504587 486 ntBASIC17.12■□□□□ 0.33
CNOT3O75175 AC111152.3-201ENST00000569699 673 ntBASIC17.12■□□□□ 0.33
CNOT3O75175 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.12■□□□□ 0.33
CNOT3O75175 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.12■□□□□ 0.33
CNOT3O75175 IFNL4P1-201ENST00000607083 540 ntBASIC17.12■□□□□ 0.33
CNOT3O75175 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNOT3O75175 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CNOT3O75175 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT3O75175 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT3O75175 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 AC018695.7-201ENST00000624587 2492 ntBASIC17.11■□□□□ 0.33
CNOT3O75175 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.11■□□□□ 0.33
CNOT3O75175 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CNOT3O75175 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CNOT3O75175 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT3O75175 KRT17P6-201ENST00000453795 1220 ntBASIC17.11■□□□□ 0.33
CNOT3O75175 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT3O75175 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT3O75175 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT3O75175 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT3O75175 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT3O75175 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT3O75175 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNOT3O75175 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT3O75175 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT3O75175 CROCCP1-201ENST00000426910 5675 ntBASIC17.11■□□□□ 0.33
CNOT3O75175 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 ESPNP-201ENST00000270691 2015 ntBASIC17.11■□□□□ 0.33
CNOT3O75175 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT3O75175 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT3O75175 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
CNOT3O75175 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CNOT3O75175 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT3O75175 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms