Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.42■□□□□ 0.54
OPHN1O60890 TOB2P1-201ENST00000469761 992 ntBASIC18.42■□□□□ 0.54
OPHN1O60890 AC079776.4-201ENST00000511039 504 ntBASIC18.42■□□□□ 0.54
OPHN1O60890 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.42■□□□□ 0.54
OPHN1O60890 AC024563.2-201ENST00000603282 481 ntBASIC18.42■□□□□ 0.54
OPHN1O60890 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.42■□□□□ 0.54
OPHN1O60890 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
OPHN1O60890 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
OPHN1O60890 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.42■□□□□ 0.54
OPHN1O60890 AC099398.1-201ENST00000567919 2776 ntBASIC18.42■□□□□ 0.54
OPHN1O60890 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.42■□□□□ 0.54
OPHN1O60890 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.42■□□□□ 0.54
OPHN1O60890 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
OPHN1O60890 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
OPHN1O60890 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.42■□□□□ 0.54
OPHN1O60890 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
OPHN1O60890 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
OPHN1O60890 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
OPHN1O60890 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
OPHN1O60890 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 AL391807.1-203ENST00000604392 2365 ntBASIC18.41■□□□□ 0.54
OPHN1O60890 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
OPHN1O60890 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.41■□□□□ 0.54
OPHN1O60890 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.41■□□□□ 0.54
OPHN1O60890 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.41■□□□□ 0.54
OPHN1O60890 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 LINC00602-201ENST00000629776 2065 ntBASIC18.41■□□□□ 0.54
OPHN1O60890 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
OPHN1O60890 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
OPHN1O60890 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
OPHN1O60890 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
OPHN1O60890 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
OPHN1O60890 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
OPHN1O60890 AC104819.1-201ENST00000504587 486 ntBASIC18.4■□□□□ 0.54
OPHN1O60890 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.4■□□□□ 0.54
OPHN1O60890 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
OPHN1O60890 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.4■□□□□ 0.54
OPHN1O60890 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
OPHN1O60890 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPHN1O60890 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
OPHN1O60890 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
OPHN1O60890 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
OPHN1O60890 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
OPHN1O60890 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
OPHN1O60890 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPHN1O60890 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
OPHN1O60890 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
OPHN1O60890 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.39■□□□□ 0.53
OPHN1O60890 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPHN1O60890 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms