Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 KRT8P10-201ENST00000450021 1447 ntBASIC16.94■□□□□ 0.3
PRAMEF4O60810 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 NSUN5P1-202ENST00000421140 1535 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 NSUN5P2-203ENST00000457352 1529 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 SLC25A1P3-201ENST00000395415 828 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 ATP5G2P1-201ENST00000433580 426 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 LINC00265-3P-201ENST00000447588 903 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 KRT17P6-201ENST00000453795 1220 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 AC091076.1-201ENST00000610741 619 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEF4O60810 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEF4O60810 TP73-AS1-210ENST00000637775 1455 ntBASIC16.93■□□□□ 0.3
PRAMEF4O60810 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 AC020916.1-201ENST00000587762 1774 ntBASIC16.92■□□□□ 0.3
PRAMEF4O60810 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 AC022211.2-201ENST00000585075 2527 ntBASIC16.92■□□□□ 0.3
PRAMEF4O60810 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 AC069148.1-201ENST00000608741 768 ntBASIC16.92■□□□□ 0.3
PRAMEF4O60810 AC092119.3-201ENST00000612618 583 ntBASIC16.92■□□□□ 0.3
PRAMEF4O60810 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEF4O60810 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEF4O60810 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 FAM220CP-201ENST00000395253 831 ntBASIC16.91■□□□□ 0.3
PRAMEF4O60810 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 AC009533.2-201ENST00000543664 586 ntBASIC16.91■□□□□ 0.3
PRAMEF4O60810 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms