Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.83■□□□□ 0.13
ZIC3O60481 AC148477.5-201ENST00000625164 1645 ntBASIC15.83■□□□□ 0.13
ZIC3O60481 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
ZIC3O60481 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
ZIC3O60481 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.83■□□□□ 0.13
ZIC3O60481 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ZIC3O60481 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.83■□□□□ 0.12
ZIC3O60481 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 AC018712.1-201ENST00000455767 687 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
ZIC3O60481 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ZIC3O60481 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ZIC3O60481 AF186996.4-201ENST00000467186 377 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 AL662844.1-201ENST00000546340 181 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 MTDHP4-201ENST00000600287 670 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 AL022326.1-202ENST00000641533 845 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ZIC3O60481 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ZIC3O60481 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZIC3O60481 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.83■□□□□ 0.12
ZIC3O60481 AC009336.1-201ENST00000608941 1553 ntBASIC15.83■□□□□ 0.12
ZIC3O60481 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
ZIC3O60481 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZIC3O60481 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.82■□□□□ 0.12
ZIC3O60481 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 AC073648.2-201ENST00000510116 352 ntBASIC15.82■□□□□ 0.12
ZIC3O60481 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 AC025062.2-201ENST00000605477 670 ntBASIC15.82■□□□□ 0.12
ZIC3O60481 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZIC3O60481 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 HLA-A-201ENST00000376802 1334 ntBASIC15.82■□□□□ 0.12
ZIC3O60481 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
ZIC3O60481 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.82■□□□□ 0.12
ZIC3O60481 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
ZIC3O60481 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 AC067852.2-201ENST00000590513 2313 ntBASIC15.82■□□□□ 0.12
ZIC3O60481 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZIC3O60481 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZIC3O60481 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.81■□□□□ 0.12
ZIC3O60481 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 GNAS-203ENST00000306120 1878 ntBASIC15.81■□□□□ 0.12
ZIC3O60481 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.81■□□□□ 0.12
ZIC3O60481 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 SIGLEC30P-201ENST00000455569 941 ntBASIC15.81■□□□□ 0.12
ZIC3O60481 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.81■□□□□ 0.12
ZIC3O60481 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms