Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDF9O60383 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GDF9O60383 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF9O60383 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF9O60383 FAM207CP-201ENST00000443486 507 ntBASIC17.04■□□□□ 0.32
GDF9O60383 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF9O60383 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF9O60383 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.04■□□□□ 0.32
GDF9O60383 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
GDF9O60383 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.04■□□□□ 0.32
GDF9O60383 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GDF9O60383 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.04■□□□□ 0.32
GDF9O60383 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 PI4KAP1-204ENST00000612579 1703 ntBASIC17.04■□□□□ 0.32
GDF9O60383 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF9O60383 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF9O60383 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
GDF9O60383 FO538757.1-201ENST00000623083 1397 ntBASIC17.03■□□□□ 0.32
GDF9O60383 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 KLF2P3-201ENST00000451977 1087 ntBASIC17.03■□□□□ 0.32
GDF9O60383 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 SLC25A39P2-201ENST00000537614 270 ntBASIC17.03■□□□□ 0.32
GDF9O60383 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 AL390754.1-201ENST00000619088 582 ntBASIC17.03■□□□□ 0.32
GDF9O60383 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GDF9O60383 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GDF9O60383 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF9O60383 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.03■□□□□ 0.32
GDF9O60383 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GDF9O60383 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GDF9O60383 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.02■□□□□ 0.32
GDF9O60383 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.02■□□□□ 0.32
GDF9O60383 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.02■□□□□ 0.32
GDF9O60383 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
GDF9O60383 FAM58DP-201ENST00000428076 619 ntBASIC17.02■□□□□ 0.32
GDF9O60383 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.02■□□□□ 0.32
GDF9O60383 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF9O60383 AC069335.1-201ENST00000489972 472 ntBASIC17.02■□□□□ 0.32
GDF9O60383 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.02■□□□□ 0.32
GDF9O60383 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms