Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 ANO7L1-203ENST00000602586 1720 ntBASIC17.47■□□□□ 0.39
PCDHGA12O60330 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AC004832.2-201ENST00000426397 482 ntBASIC17.47■□□□□ 0.39
PCDHGA12O60330 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 AL499627.1-201ENST00000569373 2188 ntBASIC17.47■□□□□ 0.39
PCDHGA12O60330 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA12O60330 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
PCDHGA12O60330 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA12O60330 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AC112482.1-201ENST00000492080 688 ntBASIC17.46■□□□□ 0.39
PCDHGA12O60330 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA12O60330 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA12O60330 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGA12O60330 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PCDHGA12O60330 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 AP002414.3-201ENST00000589352 1468 ntBASIC17.45■□□□□ 0.38
PCDHGA12O60330 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 AC090340.1-201ENST00000620778 4980 ntBASIC17.45■□□□□ 0.38
PCDHGA12O60330 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 AC002347.1-201ENST00000569543 541 ntBASIC17.45■□□□□ 0.38
PCDHGA12O60330 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA12O60330 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHGA12O60330 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA12O60330 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA12O60330 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA12O60330 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms