Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH7O60245 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH7O60245 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH7O60245 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH7O60245 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH7O60245 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH7O60245 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDH7O60245 AL136038.3-201ENST00000561909 1096 ntBASIC16.84■□□□□ 0.29
PCDH7O60245 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH7O60245 AC011498.5-201ENST00000592027 486 ntBASIC16.84■□□□□ 0.29
PCDH7O60245 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.84■□□□□ 0.29
PCDH7O60245 AL592071.1-201ENST00000611956 408 ntBASIC16.84■□□□□ 0.29
PCDH7O60245 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDH7O60245 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH7O60245 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH7O60245 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH7O60245 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH7O60245 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
PCDH7O60245 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.83■□□□□ 0.29
PCDH7O60245 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDH7O60245 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.83■□□□□ 0.29
PCDH7O60245 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH7O60245 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH7O60245 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH7O60245 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH7O60245 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH7O60245 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH7O60245 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH7O60245 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDH7O60245 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH7O60245 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCDH7O60245 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH7O60245 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 AC010460.3-201ENST00000511359 1579 ntBASIC16.82■□□□□ 0.28
PCDH7O60245 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH7O60245 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 AL049597.2-201ENST00000565575 961 ntBASIC16.82■□□□□ 0.28
PCDH7O60245 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms