Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.4■□□□□ 0.54
CREB3O43889 AL355312.1-201ENST00000407115 2176 ntBASIC18.4■□□□□ 0.54
CREB3O43889 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CREB3O43889 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 LINC00265-3P-201ENST00000447588 903 ntBASIC18.4■□□□□ 0.54
CREB3O43889 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 TOB2P1-201ENST00000469761 992 ntBASIC18.4■□□□□ 0.54
CREB3O43889 VENTXP7-201ENST00000475503 772 ntBASIC18.4■□□□□ 0.54
CREB3O43889 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 TPSP2-201ENST00000561760 610 ntBASIC18.4■□□□□ 0.54
CREB3O43889 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 AC092119.3-201ENST00000612618 583 ntBASIC18.4■□□□□ 0.54
CREB3O43889 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.4■□□□□ 0.54
CREB3O43889 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CREB3O43889 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CREB3O43889 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.4■□□□□ 0.54
CREB3O43889 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.39■□□□□ 0.54
CREB3O43889 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CREB3O43889 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CREB3O43889 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CREB3O43889 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.39■□□□□ 0.54
CREB3O43889 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.39■□□□□ 0.54
CREB3O43889 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.39■□□□□ 0.54
CREB3O43889 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CREB3O43889 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.39■□□□□ 0.53
CREB3O43889 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.39■□□□□ 0.53
CREB3O43889 DDX43P3-201ENST00000441064 443 ntBASIC18.39■□□□□ 0.53
CREB3O43889 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.39■□□□□ 0.53
CREB3O43889 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.39■□□□□ 0.53
CREB3O43889 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CREB3O43889 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.39■□□□□ 0.53
CREB3O43889 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CREB3O43889 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CREB3O43889 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.38■□□□□ 0.53
CREB3O43889 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.38■□□□□ 0.53
CREB3O43889 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.38■□□□□ 0.53
CREB3O43889 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CREB3O43889 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CREB3O43889 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CREB3O43889 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.38■□□□□ 0.53
CREB3O43889 DRAXINP1-201ENST00000437611 948 ntBASIC18.38■□□□□ 0.53
CREB3O43889 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.38■□□□□ 0.53
CREB3O43889 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.38■□□□□ 0.53
CREB3O43889 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.38■□□□□ 0.53
CREB3O43889 AP005901.3-202ENST00000581653 237 ntBASIC18.38■□□□□ 0.53
CREB3O43889 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.38■□□□□ 0.53
CREB3O43889 AC005336.2-201ENST00000593183 939 ntBASIC18.38■□□□□ 0.53
CREB3O43889 AL353801.3-201ENST00000609898 542 ntBASIC18.38■□□□□ 0.53
CREB3O43889 NPAP1P7-201ENST00000613027 823 ntBASIC18.38■□□□□ 0.53
CREB3O43889 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CREB3O43889 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms