Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.16■□□□□ 0.5
COCHO43405 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COCHO43405 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.16■□□□□ 0.5
COCHO43405 ELK2BP-201ENST00000415014 1224 ntBASIC18.16■□□□□ 0.5
COCHO43405 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.16■□□□□ 0.5
COCHO43405 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
COCHO43405 AC005593.1-201ENST00000624894 515 ntBASIC18.16■□□□□ 0.5
COCHO43405 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
COCHO43405 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 AC006116.8-202ENST00000587620 1550 ntBASIC18.16■□□□□ 0.5
COCHO43405 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COCHO43405 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 AC097637.2-201ENST00000624096 1997 ntBASIC18.15■□□□□ 0.5
COCHO43405 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 AC009947.1-201ENST00000444350 727 ntBASIC18.15■□□□□ 0.5
COCHO43405 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.15■□□□□ 0.5
COCHO43405 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
COCHO43405 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
COCHO43405 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.15■□□□□ 0.5
COCHO43405 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COCHO43405 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COCHO43405 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
COCHO43405 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COCHO43405 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.14■□□□□ 0.5
COCHO43405 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.14■□□□□ 0.5
COCHO43405 AL390961.4-201ENST00000623958 2535 ntBASIC18.14■□□□□ 0.49
COCHO43405 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.14■□□□□ 0.49
COCHO43405 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COCHO43405 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.14■□□□□ 0.49
COCHO43405 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.14■□□□□ 0.49
COCHO43405 TERC-201ENST00000602385 541 ntBASIC18.14■□□□□ 0.49
COCHO43405 AL139424.1-201ENST00000607572 797 ntBASIC18.14■□□□□ 0.49
COCHO43405 AC027601.4-201ENST00000611259 610 ntBASIC18.14■□□□□ 0.49
COCHO43405 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.14■□□□□ 0.49
COCHO43405 PGM5P2-202ENST00000637225 1043 ntBASIC18.14■□□□□ 0.49
COCHO43405 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.14■□□□□ 0.49
COCHO43405 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.14■□□□□ 0.49
COCHO43405 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.14■□□□□ 0.49
COCHO43405 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COCHO43405 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COCHO43405 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
COCHO43405 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COCHO43405 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COCHO43405 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COCHO43405 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COCHO43405 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
COCHO43405 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.13■□□□□ 0.49
COCHO43405 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COCHO43405 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
COCHO43405 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COCHO43405 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.13■□□□□ 0.49
COCHO43405 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.13■□□□□ 0.49
COCHO43405 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.13■□□□□ 0.49
COCHO43405 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms