Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LAMA5O15230 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LAMA5O15230 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMA5O15230 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMA5O15230 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.17■□□□□ 0.18
LAMA5O15230 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.17■□□□□ 0.18
LAMA5O15230 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMA5O15230 AL162274.1-201ENST00000617191 1098 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 AC084121.4-201ENST00000641598 221 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 AF228730.8-201ENST00000642140 221 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.17■□□□□ 0.18
LAMA5O15230 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LAMA5O15230 AC022144.1-201ENST00000602255 1580 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 PHGDH-209ENST00000641074 1780 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LAMA5O15230 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 AC073130.3-201ENST00000624389 2278 ntBASIC16.17■□□□□ 0.18
LAMA5O15230 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.17■□□□□ 0.18
LAMA5O15230 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.17■□□□□ 0.18
LAMA5O15230 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMA5O15230 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.17■□□□□ 0.18
LAMA5O15230 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LAMA5O15230 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.17■□□□□ 0.18
LAMA5O15230 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMA5O15230 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 AC009949.1-201ENST00000623048 1830 ntBASIC16.16■□□□□ 0.18
LAMA5O15230 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 DDX43P3-201ENST00000441064 443 ntBASIC16.16■□□□□ 0.18
LAMA5O15230 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMA5O15230 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LAMA5O15230 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 AL158211.3-201ENST00000607385 239 ntBASIC16.16■□□□□ 0.18
LAMA5O15230 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.16■□□□□ 0.18
LAMA5O15230 FAM185BP-201ENST00000443595 716 ntBASIC16.16■□□□□ 0.18
LAMA5O15230 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.16■□□□□ 0.18
LAMA5O15230 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LAMA5O15230 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LAMA5O15230 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
LAMA5O15230 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA5O15230 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA5O15230 AC017083.2-201ENST00000608069 979 ntBASIC16.15■□□□□ 0.18
LAMA5O15230 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LAMA5O15230 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
LAMA5O15230 PTCHD3P3-201ENST00000403073 906 ntBASIC16.15■□□□□ 0.18
LAMA5O15230 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 KRT17P8-201ENST00000540749 863 ntBASIC16.15■□□□□ 0.18
LAMA5O15230 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LAMA5O15230 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.15■□□□□ 0.18
LAMA5O15230 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA5O15230 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA5O15230 AC112191.1-201ENST00000523689 701 ntBASIC16.15■□□□□ 0.18
LAMA5O15230 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.15■□□□□ 0.18
LAMA5O15230 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA5O15230 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms