Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.03■□□□□ 0.16
SMAD9O15198 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMAD9O15198 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD9O15198 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD9O15198 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.02■□□□□ 0.16
SMAD9O15198 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD9O15198 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD9O15198 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD9O15198 AC011840.4-201ENST00000578471 627 ntBASIC16.02■□□□□ 0.16
SMAD9O15198 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD9O15198 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD9O15198 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.02■□□□□ 0.16
SMAD9O15198 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD9O15198 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
SMAD9O15198 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.02■□□□□ 0.16
SMAD9O15198 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
SMAD9O15198 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD9O15198 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SMAD9O15198 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.02■□□□□ 0.15
SMAD9O15198 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.02■□□□□ 0.15
SMAD9O15198 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.02■□□□□ 0.15
SMAD9O15198 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD9O15198 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.02■□□□□ 0.15
SMAD9O15198 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.02■□□□□ 0.15
SMAD9O15198 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.01■□□□□ 0.15
SMAD9O15198 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 AC233702.3-201ENST00000578656 1387 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 KRT8P47-201ENST00000604727 1398 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 AC100803.2-201ENST00000562459 1963 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SMAD9O15198 AC246785.2-201ENST00000432512 513 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 AC091607.1-201ENST00000490318 1060 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 AP005901.3-202ENST00000581653 237 ntBASIC16.01■□□□□ 0.15
SMAD9O15198 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SMAD9O15198 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD9O15198 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD9O15198 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD9O15198 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD9O15198 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16■□□□□ 0.15
SMAD9O15198 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMAD9O15198 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD9O15198 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMAD9O15198 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms