Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KRT18P32-201ENST00000424695 1287 ntBASIC16.85■□□□□ 0.29
CDX4O14627 AC140658.5-201ENST00000438532 169 ntBASIC16.85■□□□□ 0.29
CDX4O14627 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.85■□□□□ 0.29
CDX4O14627 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.85■□□□□ 0.29
CDX4O14627 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.85■□□□□ 0.29
CDX4O14627 AP005018.1-201ENST00000525475 301 ntBASIC16.85■□□□□ 0.29
CDX4O14627 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.85■□□□□ 0.29
CDX4O14627 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.85■□□□□ 0.29
CDX4O14627 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.85■□□□□ 0.29
CDX4O14627 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.85■□□□□ 0.29
CDX4O14627 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.85■□□□□ 0.29
CDX4O14627 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.84■□□□□ 0.29
CDX4O14627 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.84■□□□□ 0.29
CDX4O14627 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.84■□□□□ 0.29
CDX4O14627 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.84■□□□□ 0.29
CDX4O14627 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.84■□□□□ 0.29
CDX4O14627 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.84■□□□□ 0.29
CDX4O14627 FO538757.1-201ENST00000623083 1397 ntBASIC16.84■□□□□ 0.29
CDX4O14627 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CDX4O14627 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.84■□□□□ 0.29
CDX4O14627 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
CDX4O14627 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
CDX4O14627 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDX4O14627 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDX4O14627 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDX4O14627 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDX4O14627 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDX4O14627 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CDX4O14627 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.83■□□□□ 0.28
CDX4O14627 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.83■□□□□ 0.28
CDX4O14627 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.83■□□□□ 0.28
CDX4O14627 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 MEIS3P1-201ENST00000495167 958 ntBASIC16.83■□□□□ 0.28
CDX4O14627 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.83■□□□□ 0.28
CDX4O14627 SLC25A39P2-201ENST00000537614 270 ntBASIC16.83■□□□□ 0.28
CDX4O14627 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.83■□□□□ 0.28
CDX4O14627 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.83■□□□□ 0.28
CDX4O14627 DUX4L17-201ENST00000557360 1267 ntBASIC16.83■□□□□ 0.28
CDX4O14627 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
CDX4O14627 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.83■□□□□ 0.28
CDX4O14627 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDX4O14627 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.83■□□□□ 0.28
CDX4O14627 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.83■□□□□ 0.28
CDX4O14627 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.83■□□□□ 0.28
CDX4O14627 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CDX4O14627 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.82■□□□□ 0.28
CDX4O14627 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDX4O14627 AC009949.1-201ENST00000623048 1830 ntBASIC16.82■□□□□ 0.28
CDX4O14627 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
CDX4O14627 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.82■□□□□ 0.28
CDX4O14627 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDX4O14627 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDX4O14627 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDX4O14627 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDX4O14627 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CDX4O14627 TREML5P-201ENST00000421694 576 ntBASIC16.82■□□□□ 0.28
CDX4O14627 RN7SL589P-201ENST00000481268 310 ntBASIC16.82■□□□□ 0.28
CDX4O14627 AC125807.1-201ENST00000483097 614 ntBASIC16.82■□□□□ 0.28
CDX4O14627 AC002558.1-201ENST00000488906 803 ntBASIC16.82■□□□□ 0.28
CDX4O14627 SLC25A6P2-201ENST00000497974 877 ntBASIC16.82■□□□□ 0.28
CDX4O14627 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
CDX4O14627 AC140878.1-201ENST00000565277 250 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms