Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM38O00635 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 REXO1L9P-201ENST00000604264 2108 ntBASIC17.74■□□□□ 0.43
TRIM38O00635 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM38O00635 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
TRIM38O00635 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM38O00635 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM38O00635 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM38O00635 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM38O00635 AL773604.1-201ENST00000617417 272 ntBASIC17.74■□□□□ 0.43
TRIM38O00635 AC114341.1-201ENST00000618070 349 ntBASIC17.74■□□□□ 0.43
TRIM38O00635 AC148477.8-201ENST00000624298 468 ntBASIC17.74■□□□□ 0.43
TRIM38O00635 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM38O00635 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM38O00635 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRIM38O00635 IL9RP2-201ENST00000423948 1312 ntBASIC17.73■□□□□ 0.43
TRIM38O00635 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM38O00635 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM38O00635 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 AC132008.2-207ENST00000454517 770 ntBASIC17.73■□□□□ 0.43
TRIM38O00635 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM38O00635 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM38O00635 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM38O00635 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 PCDHA12-202ENST00000613593 2588 ntBASIC17.73■□□□□ 0.43
TRIM38O00635 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
TRIM38O00635 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM38O00635 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM38O00635 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM38O00635 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 AL031284.1-201ENST00000419297 478 ntBASIC17.72■□□□□ 0.43
TRIM38O00635 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 AC113404.2-201ENST00000507884 177 ntBASIC17.72■□□□□ 0.43
TRIM38O00635 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM38O00635 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM38O00635 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM38O00635 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms