Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 AL139400.1-201ENST00000366220 510 ntBASIC16.56■□□□□ 0.24
NTN3O00634 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NTN3O00634 TSEN15P1-201ENST00000423257 515 ntBASIC16.56■□□□□ 0.24
NTN3O00634 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.56■□□□□ 0.24
NTN3O00634 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.56■□□□□ 0.24
NTN3O00634 ACTL9-202ENST00000612068 1252 ntBASIC16.56■□□□□ 0.24
NTN3O00634 AC105339.1-204ENST00000636249 355 ntBASIC16.56■□□□□ 0.24
NTN3O00634 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.56■□□□□ 0.24
NTN3O00634 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 AL121761.2-201ENST00000598007 1648 ntBASIC16.56■□□□□ 0.24
NTN3O00634 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NTN3O00634 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NTN3O00634 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NTN3O00634 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.55■□□□□ 0.24
NTN3O00634 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 MIR3197-201ENST00000582241 73 ntBASIC16.55■□□□□ 0.24
NTN3O00634 AC004835.2-201ENST00000603762 682 ntBASIC16.55■□□□□ 0.24
NTN3O00634 REXO1L3P-201ENST00000622202 1288 ntBASIC16.55■□□□□ 0.24
NTN3O00634 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NTN3O00634 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.55■□□□□ 0.24
NTN3O00634 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NTN3O00634 REXO1L11P-201ENST00000620964 1927 ntBASIC16.55■□□□□ 0.24
NTN3O00634 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.54■□□□□ 0.24
NTN3O00634 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NTN3O00634 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NTN3O00634 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NTN3O00634 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.54■□□□□ 0.24
NTN3O00634 AC004461.1-201ENST00000412461 403 ntBASIC16.54■□□□□ 0.24
NTN3O00634 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.54■□□□□ 0.24
NTN3O00634 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.54■□□□□ 0.24
NTN3O00634 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.54■□□□□ 0.24
NTN3O00634 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.54■□□□□ 0.24
NTN3O00634 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NTN3O00634 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NTN3O00634 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms