Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.56■■□□□ 1.2
CHL1O00533 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.56■■□□□ 1.2
CHL1O00533 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CHL1O00533 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 LINC00982-205ENST00000420957 435 ntBASIC22.56■■□□□ 1.2
CHL1O00533 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.56■■□□□ 1.2
CHL1O00533 RPL13AP23-201ENST00000480739 586 ntBASIC22.56■■□□□ 1.2
CHL1O00533 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.56■■□□□ 1.2
CHL1O00533 AL356488.2-201ENST00000602755 427 ntBASIC22.56■■□□□ 1.2
CHL1O00533 AC117500.6-201ENST00000624871 588 ntBASIC22.56■■□□□ 1.2
CHL1O00533 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.56■■□□□ 1.2
CHL1O00533 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHL1O00533 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHL1O00533 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.55■■□□□ 1.2
CHL1O00533 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.55■■□□□ 1.2
CHL1O00533 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.55■■□□□ 1.2
CHL1O00533 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.55■■□□□ 1.2
CHL1O00533 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.55■■□□□ 1.2
CHL1O00533 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.55■■□□□ 1.2
CHL1O00533 AC106730.1-201ENST00000566722 1090 ntBASIC22.55■■□□□ 1.2
CHL1O00533 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CHL1O00533 AC067852.2-201ENST00000590513 2313 ntBASIC22.55■■□□□ 1.2
CHL1O00533 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CHL1O00533 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHL1O00533 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.54■■□□□ 1.2
CHL1O00533 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 ELK2BP-201ENST00000415014 1224 ntBASIC22.54■■□□□ 1.2
CHL1O00533 ACTG1P4-201ENST00000425123 1122 ntBASIC22.54■■□□□ 1.2
CHL1O00533 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.54■■□□□ 1.2
CHL1O00533 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.54■■□□□ 1.2
CHL1O00533 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 AL133373.2-201ENST00000623187 2828 ntBASIC22.54■■□□□ 1.2
CHL1O00533 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC22.54■■□□□ 1.2
CHL1O00533 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CHL1O00533 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHL1O00533 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CHL1O00533 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.53■■□□□ 1.2
CHL1O00533 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.53■■□□□ 1.2
CHL1O00533 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.53■■□□□ 1.2
CHL1O00533 RNA5SP415-201ENST00000517246 115 ntBASIC22.53■■□□□ 1.2
CHL1O00533 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.53■■□□□ 1.2
CHL1O00533 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.53■■□□□ 1.2
CHL1O00533 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHL1O00533 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 GNAS-203ENST00000306120 1878 ntBASIC22.53■■□□□ 1.2
CHL1O00533 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.53■■□□□ 1.2
CHL1O00533 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHL1O00533 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.52■■□□□ 1.2
CHL1O00533 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CHL1O00533 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CHL1O00533 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.52■■□□□ 1.2
CHL1O00533 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHL1O00533 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHL1O00533 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 MIR574-201ENST00000385209 96 ntBASIC22.52■■□□□ 1.2
CHL1O00533 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.52■■□□□ 1.2
CHL1O00533 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 AC136632.2-201ENST00000512891 861 ntBASIC22.52■■□□□ 1.2
CHL1O00533 UNC93B6-202ENST00000528242 690 ntBASIC22.52■■□□□ 1.2
CHL1O00533 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.52■■□□□ 1.2
CHL1O00533 AC034105.1-201ENST00000563488 319 ntBASIC22.52■■□□□ 1.2
CHL1O00533 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 AC018470.1-201ENST00000624790 3129 ntBASIC22.52■■□□□ 1.2
CHL1O00533 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHL1O00533 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms