Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC091607.1-201ENST00000490318 1060 ntBASIC17.24■□□□□ 0.35
EIF3FO00303 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 MIR3180-1-201ENST00000580374 94 ntBASIC17.24■□□□□ 0.35
EIF3FO00303 MIR3180-3-201ENST00000584616 94 ntBASIC17.24■□□□□ 0.35
EIF3FO00303 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.24■□□□□ 0.35
EIF3FO00303 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 LYSMD4-203ENST00000378904 2122 ntBASIC17.24■□□□□ 0.35
EIF3FO00303 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
EIF3FO00303 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EIF3FO00303 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EIF3FO00303 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
EIF3FO00303 IGHV3-47-201ENST00000425060 335 ntBASIC17.23■□□□□ 0.35
EIF3FO00303 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.23■□□□□ 0.35
EIF3FO00303 AC012615.1-201ENST00000565797 1299 ntBASIC17.23■□□□□ 0.35
EIF3FO00303 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.23■□□□□ 0.35
EIF3FO00303 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.23■□□□□ 0.35
EIF3FO00303 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.23■□□□□ 0.35
EIF3FO00303 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.23■□□□□ 0.35
EIF3FO00303 AL353593.2-201ENST00000602529 1483 ntBASIC17.23■□□□□ 0.35
EIF3FO00303 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 AL049757.1-201ENST00000616842 1596 ntBASIC17.23■□□□□ 0.35
EIF3FO00303 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EIF3FO00303 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.23■□□□□ 0.35
EIF3FO00303 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.22■□□□□ 0.35
EIF3FO00303 POM121L3P-201ENST00000419331 1163 ntBASIC17.22■□□□□ 0.35
EIF3FO00303 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.22■□□□□ 0.35
EIF3FO00303 AC109462.3-201ENST00000573934 613 ntBASIC17.22■□□□□ 0.35
EIF3FO00303 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.22■□□□□ 0.35
EIF3FO00303 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
EIF3FO00303 AC092329.2-201ENST00000598402 547 ntBASIC17.22■□□□□ 0.35
EIF3FO00303 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EIF3FO00303 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EIF3FO00303 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.22■□□□□ 0.35
EIF3FO00303 NSUN5P1-202ENST00000421140 1535 ntBASIC17.21■□□□□ 0.35
EIF3FO00303 NSUN5P2-203ENST00000457352 1529 ntBASIC17.21■□□□□ 0.35
EIF3FO00303 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
EIF3FO00303 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
EIF3FO00303 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.21■□□□□ 0.35
EIF3FO00303 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EIF3FO00303 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EIF3FO00303 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms