Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC009533.2-201ENST00000543664 586 ntBASIC17.28■□□□□ 0.36
TAF4O00268 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.28■□□□□ 0.36
TAF4O00268 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.28■□□□□ 0.36
TAF4O00268 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.28■□□□□ 0.36
TAF4O00268 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.28■□□□□ 0.36
TAF4O00268 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.28■□□□□ 0.36
TAF4O00268 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.27■□□□□ 0.36
TAF4O00268 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.27■□□□□ 0.36
TAF4O00268 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.27■□□□□ 0.36
TAF4O00268 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.27■□□□□ 0.36
TAF4O00268 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TAF4O00268 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.27■□□□□ 0.36
TAF4O00268 OR7E14P-202ENST00000530490 1290 ntBASIC17.27■□□□□ 0.36
TAF4O00268 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.27■□□□□ 0.36
TAF4O00268 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.27■□□□□ 0.36
TAF4O00268 SNHG9-202ENST00000564014 471 ntBASIC17.27■□□□□ 0.36
TAF4O00268 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.27■□□□□ 0.36
TAF4O00268 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.27■□□□□ 0.36
TAF4O00268 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TAF4O00268 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.27■□□□□ 0.35
TAF4O00268 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.27■□□□□ 0.35
TAF4O00268 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TAF4O00268 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
TAF4O00268 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 AL109659.2-201ENST00000606809 1674 ntBASIC17.26■□□□□ 0.35
TAF4O00268 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 TP73-AS1-210ENST00000637775 1455 ntBASIC17.26■□□□□ 0.35
TAF4O00268 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 PAWRP1-201ENST00000451083 565 ntBASIC17.26■□□□□ 0.35
TAF4O00268 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
TAF4O00268 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.26■□□□□ 0.35
TAF4O00268 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.26■□□□□ 0.35
TAF4O00268 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.26■□□□□ 0.35
TAF4O00268 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.26■□□□□ 0.35
TAF4O00268 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TAF4O00268 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TAF4O00268 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TAF4O00268 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms