Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 LYSMD4-203ENST00000378904 2122 ntBASIC17.81■□□□□ 0.44
AP3B1O00203 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
AP3B1O00203 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.81■□□□□ 0.44
AP3B1O00203 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.81■□□□□ 0.44
AP3B1O00203 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.81■□□□□ 0.44
AP3B1O00203 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.81■□□□□ 0.44
AP3B1O00203 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
AP3B1O00203 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP3B1O00203 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3B1O00203 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3B1O00203 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.8■□□□□ 0.44
AP3B1O00203 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 TMPOP1-202ENST00000424642 1267 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 AC103564.2-201ENST00000432853 1299 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 RN7SL606P-201ENST00000472779 293 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 AC122714.2-201ENST00000502787 707 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 AC011840.4-201ENST00000578471 627 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 AC011498.5-201ENST00000592027 486 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3B1O00203 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3B1O00203 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3B1O00203 AL121761.2-201ENST00000598007 1648 ntBASIC17.8■□□□□ 0.44
AP3B1O00203 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
AP3B1O00203 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
AP3B1O00203 RCN1P1-201ENST00000400413 996 ntBASIC17.79■□□□□ 0.44
AP3B1O00203 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.79■□□□□ 0.44
AP3B1O00203 AC246785.2-201ENST00000432512 513 ntBASIC17.79■□□□□ 0.44
AP3B1O00203 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.79■□□□□ 0.44
AP3B1O00203 KRT8P26-201ENST00000534154 1276 ntBASIC17.79■□□□□ 0.44
AP3B1O00203 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 RN7SL850P-201ENST00000579959 291 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms