Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 AC007967.3-201ENST00000434308 558 ntBASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 AC005336.2-201ENST00000593183 939 ntBASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 AC124864.1-201ENST00000623408 392 ntBASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM49BA6NDI0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM49BA6NDI0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.39■□□□□ 0.7
TRIM49BA6NDI0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TRIM49BA6NDI0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.39■□□□□ 0.7
TRIM49BA6NDI0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AL031133.1-201ENST00000406807 723 ntBASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 NKILA-202ENST00000614771 2598 ntBASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 AC011676.5-201ENST00000624864 2660 ntBASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM49BA6NDI0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM49BA6NDI0 COX5BP2-201ENST00000392354 334 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms