Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 AC113404.2-201ENST00000507884 177 ntBASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 AL353719.1-201ENST00000566847 864 ntBASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 AC073648.6-201ENST00000641589 218 ntBASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 AC093525.9-201ENST00000624961 1746 ntBASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV3S1A0A5B6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 CRYGFP-201ENST00000418459 633 ntBASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 KRT18P65-201ENST00000439811 1286 ntBASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 CD177P1-201ENST00000606252 935 ntBASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV3S1A0A5B6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 SEC1P-202ENST00000473944 940 ntBASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 NUDT16P1-203ENST00000513809 620 ntBASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms