Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRDV1A0A1B0GX56 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AC078925.2-201ENST00000624013 1973 ntBASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 RNA5SP413-201ENST00000516373 109 ntBASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AC008741.2-201ENST00000612792 3115 ntBASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 AC092068.3-201ENST00000587894 2016 ntBASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRDV1A0A1B0GX56 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 KRT8P47-201ENST00000604727 1398 ntBASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 KRT18P29-201ENST00000397031 1267 ntBASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 AC116562.2-201ENST00000507042 360 ntBASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 RNF216P1-203ENST00000404404 2427 ntBASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRDV1A0A1B0GX56 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRDV1A0A1B0GX56 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms