Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 MTMR9LP-203ENST00000426597 1545 ntBASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 NFYC-AS1-201ENST00000606277 1687 ntBASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 AC078925.2-201ENST00000624013 1973 ntBASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 LINC00528-201ENST00000600723 2160 ntBASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 MTHFR-217ENST00000641820 1569 ntBASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 PCDHA3-202ENST00000532566 4594 ntBASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 AC009090.5-201ENST00000624886 2285 ntBASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms