Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AC046185.3-201ENST00000623228 1824 ntBASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AL035633.1-201ENST00000406139 838 ntBASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AL627223.1-201ENST00000416693 442 ntBASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 FAM8A3P-201ENST00000427218 844 ntBASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AC107918.2-201ENST00000530817 355 ntBASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 AL096865.1-201ENST00000606796 927 ntBASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN10AQ9Y5Y9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 AC005498.2-205ENST00000593218 784 ntBASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.12■□□□□ 0.65
SCN10AQ9Y5Y9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 LINC00304-203ENST00000565008 1864 ntBASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 AL121761.2-201ENST00000598007 1648 ntBASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCN10AQ9Y5Y9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms