Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA11Q9Y5H2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 AC022211.2-201ENST00000585075 2527 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 BX276092.7-203ENST00000637198 1536 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 HLA-J-201ENST00000462773 1622 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 GUSBP12-201ENST00000513727 720 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 KRT18P21-201ENST00000515767 1272 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 AL136038.3-201ENST00000561909 1096 ntBASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA11Q9Y5H2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA11Q9Y5H2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms