Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 MTCL1P1-201ENST00000446207 792 ntBASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SCARNA2-201ENST00000458748 420 ntBASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AC073648.2-201ENST00000510116 352 ntBASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AL138831.2-201ENST00000606564 490 ntBASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 AC148477.8-201ENST00000624298 468 ntBASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA3Q9Y5H0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 KRT18P58-201ENST00000527480 1120 ntBASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 AC011467.2-201ENST00000598425 242 ntBASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA3Q9Y5H0 INTS4P1-201ENST00000438455 1935 ntBASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA3Q9Y5H0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms