Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC012640.2-201ENST00000561606 901 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 AC040169.1-201ENST00000565382 521 ntBASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA9Q9Y5G4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 NKAPP1-205ENST00000585790 367 ntBASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 MTDHP4-201ENST00000600287 670 ntBASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 AP000867.4-201ENST00000641616 219 ntBASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 LINC01126-201ENST00000623515 1646 ntBASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA9Q9Y5G4 AC097374.2-201ENST00000618617 1306 ntBASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MIR3687-2-201ENST00000577708 61 ntBASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MIR3687-1-201ENST00000614492 61 ntBASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA9Q9Y5G4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 RPSAP43-201ENST00000402237 625 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms