Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 LINC00896-202ENST00000609602 2128 ntBASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 KRT18P13-201ENST00000400056 1290 ntBASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 AP005901.3-202ENST00000581653 237 ntBASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 AF228730.7-201ENST00000641842 219 ntBASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 KRT18P55-202ENST00000578578 1546 ntBASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB11Q9Y5F2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AC116407.2-201ENST00000613639 860 ntBASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB11Q9Y5F2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 IL9RP2-201ENST00000423948 1312 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms