Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC010503.4-201ENST00000615487 688 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 WASH6P-202ENST00000359512 1437 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL512430.1-201ENST00000392575 860 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AC010234.1-201ENST00000494599 870 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 FAM86HP-204ENST00000513466 959 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 RARRES2P8-201ENST00000566335 367 ntBASIC7.13□□□□□ -1.27
MACF1Q9UPN3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MACF1Q9UPN3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 PI4KAP1-204ENST00000612579 1703 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 LBX2-AS1-202ENST00000603175 2083 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AC116165.1-201ENST00000611806 668 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AL049757.1-201ENST00000616842 1596 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SLC7A15P-201ENST00000424028 1363 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 ZNF890P-202ENST00000530367 1156 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 HLA-C-210ENST00000640219 976 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AL590787.1-201ENST00000568856 1315 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 AC009542.2-202ENST00000619004 1067 ntBASIC7.12□□□□□ -1.27
MACF1Q9UPN3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
MACF1Q9UPN3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms