Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 PMPCAP1-201ENST00000508114 1576 ntBASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 DUSP5P1-201ENST00000441325 1139 ntBASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 STK25P1-201ENST00000585406 838 ntBASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 AC132938.5-201ENST00000624980 1813 ntBASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHA4Q9UN74 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 AC073592.5-201ENST00000624854 528 ntBASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHA4Q9UN74 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 AP001269.4-201ENST00000609611 512 ntBASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHA4Q9UN74 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms