Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 AP002414.1-201ENST00000391405 1147 ntBASIC19.97■□□□□ 0.79
FBXO40Q9UH90 HCG4B-203ENST00000450128 991 ntBASIC19.97■□□□□ 0.79
FBXO40Q9UH90 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 GGTLC5P-201ENST00000617623 998 ntBASIC19.97■□□□□ 0.79
FBXO40Q9UH90 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.97■□□□□ 0.79
FBXO40Q9UH90 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 AC090164.3-201ENST00000610780 2143 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 MRPL20P1-201ENST00000400819 433 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 LINC00982-205ENST00000420957 435 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 AP001160.2-201ENST00000596071 487 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 AC010654.1-201ENST00000615722 808 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 AC004790.2-201ENST00000623588 572 ntBASIC19.96■□□□□ 0.79
FBXO40Q9UH90 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO40Q9UH90 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
FBXO40Q9UH90 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FBXO40Q9UH90 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 AC104581.1-202ENST00000635932 2618 ntBASIC19.94■□□□□ 0.78
FBXO40Q9UH90 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 PTCHD3P3-201ENST00000403073 906 ntBASIC19.94■□□□□ 0.78
FBXO40Q9UH90 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 AC134684.3-201ENST00000641758 218 ntBASIC19.94■□□□□ 0.78
FBXO40Q9UH90 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FBXO40Q9UH90 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms