Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.3■□□□□ 0.2
DKK4Q9UBT3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DKK4Q9UBT3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DKK4Q9UBT3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.3■□□□□ 0.2
DKK4Q9UBT3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
DKK4Q9UBT3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 ACTG1P4-201ENST00000425123 1122 ntBASIC16.29■□□□□ 0.2
DKK4Q9UBT3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 ATP5G2P4-201ENST00000442175 420 ntBASIC16.29■□□□□ 0.2
DKK4Q9UBT3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 AC084121.4-201ENST00000641598 221 ntBASIC16.29■□□□□ 0.2
DKK4Q9UBT3 AL645728.2-201ENST00000641974 660 ntBASIC16.29■□□□□ 0.2
DKK4Q9UBT3 AF228730.8-201ENST00000642140 221 ntBASIC16.29■□□□□ 0.2
DKK4Q9UBT3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DKK4Q9UBT3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 AC129492.6-201ENST00000611383 1305 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 RBPMS2P1-201ENST00000437762 623 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 IGHV3-42-201ENST00000520410 361 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 AC109462.3-201ENST00000573934 613 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 AC009118.2-201ENST00000613275 655 ntBASIC16.28■□□□□ 0.2
DKK4Q9UBT3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DKK4Q9UBT3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AL499627.1-201ENST00000569373 2188 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 ARSEP1-201ENST00000420443 635 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 RN7SL692P-201ENST00000464677 288 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 IGHV3-52-201ENST00000519770 353 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AC069120.2-201ENST00000524091 540 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 RARRES2P8-201ENST00000566335 367 ntBASIC16.27■□□□□ 0.2
DKK4Q9UBT3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DKK4Q9UBT3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DKK4Q9UBT3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
DKK4Q9UBT3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms