Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPS2P1-201ENST00000434010 821 ntBASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 LINC00896-202ENST00000609602 2128 ntBASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 AC134043.2-201ENST00000624206 2238 ntBASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC6Q9UBN7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 TERC-201ENST00000602385 541 ntBASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 AL356309.3-201ENST00000624132 1934 ntBASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC6Q9UBN7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 ZNF259P1-201ENST00000407656 1365 ntBASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.91■□□□□ 0.78
HDAC6Q9UBN7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AC092865.5-201ENST00000545435 363 ntBASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 PMS2P7-201ENST00000506558 1336 ntBASIC19.9■□□□□ 0.78
HDAC6Q9UBN7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms