Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PRYP5-201ENST00000451909 266 ntBASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 IGHV3-52-201ENST00000519770 353 ntBASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 AC116407.3-201ENST00000623905 1129 ntBASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 HLA-J-201ENST00000462773 1622 ntBASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE7Q9UBL6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 AL020989.1-201ENST00000422979 469 ntBASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 AC107918.4-202ENST00000641623 219 ntBASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 AC135050.7-201ENST00000624508 2218 ntBASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE7Q9UBL6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 AC003669.1-201ENST00000334569 611 ntBASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 LAGE3P1-201ENST00000425356 484 ntBASIC17.07■□□□□ 0.32
CPNE7Q9UBL6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms