Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 TAAR4P-201ENST00000454843 1039 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 COL6A4P2-205ENST00000509855 506 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 MTATP6P9-201ENST00000515039 680 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AP003033.1-201ENST00000527244 415 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 PCDHB18P-201ENST00000524813 2368 ntBASIC20.54■□□□□ 0.88
RNF216Q9NWF9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF216Q9NWF9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC073143.1-201ENST00000436316 395 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC092647.3-201ENST00000443044 633 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 HSPA8P3-201ENST00000449300 780 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC008592.3-201ENST00000514941 418 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC005730.2-201ENST00000564549 1184 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 MIR4674-201ENST00000582457 87 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 RN7SL488P-201ENST00000585186 286 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC040174.2-201ENST00000602701 465 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC239803.2-201ENST00000610161 430 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AL691432.3-201ENST00000621860 400 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 AC020916.1-201ENST00000587762 1774 ntBASIC20.53■□□□□ 0.88
RNF216Q9NWF9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF216Q9NWF9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 RNU2-72P-201ENST00000411175 163 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 MTND4LP11-201ENST00000422184 280 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AL450487.1-201ENST00000426799 995 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 ATP5G2P1-201ENST00000433580 426 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AL606517.1-201ENST00000446914 387 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 RASA4DP-201ENST00000460726 1199 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AC112250.1-201ENST00000504640 745 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 MTCO3P42-201ENST00000509488 518 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 MTCO3P39-201ENST00000514812 518 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 OR8X1P-201ENST00000534542 869 ntBASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF216Q9NWF9 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms