Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 MIR5100-201ENST00000579544 119 ntBASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BLOC1S4Q9NUP1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 NUS1P2-201ENST00000417358 873 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 IGHV3-52-201ENST00000519770 353 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AC138894.3-201ENST00000603787 634 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 AL023806.1-201ENST00000603994 1649 ntBASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.57■□□□□ 0.72
BLOC1S4Q9NUP1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 MYCLP1-201ENST00000372451 1075 ntBASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 NUS1P1-201ENST00000446295 882 ntBASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 FOSL1P1-201ENST00000511041 816 ntBASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 PMPCAP1-201ENST00000508114 1576 ntBASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BLOC1S4Q9NUP1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 SLC25A1P3-201ENST00000395415 828 ntBASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.55■□□□□ 0.72
BLOC1S4Q9NUP1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms