Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PMPCAP1-201ENST00000508114 1576 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PP12613-201ENST00000424958 2230 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 DUSP5P1-201ENST00000441325 1139 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AC132008.2-207ENST00000454517 770 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AC091304.2-201ENST00000564639 760 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 STK25P1-201ENST00000585406 838 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AP000867.4-201ENST00000641616 219 ntBASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ECHDC1Q9NTX5 AC132938.5-201ENST00000624980 1813 ntBASIC21.45■■□□□ 1.03
ECHDC1Q9NTX5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.45■■□□□ 1.03
ECHDC1Q9NTX5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ECHDC1Q9NTX5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ECHDC1Q9NTX5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ABCD1P5-201ENST00000445663 754 ntBASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ECHDC1Q9NTX5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ECHDC1Q9NTX5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 BCL2-203ENST00000589955 5011 ntBASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ECHDC1Q9NTX5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms