Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 AL591424.1-201ENST00000442569 1213 ntBASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 AC010327.4-202ENST00000591484 748 ntBASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 AL355385.1-201ENST00000606123 409 ntBASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 GNAS-203ENST00000306120 1878 ntBASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 AC134043.2-201ENST00000624206 2238 ntBASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF3Q9NR81 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 PMS2P2-201ENST00000425039 1128 ntBASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 HCG11-201ENST00000411553 5696 ntBASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 AL357033.4-201ENST00000617703 1807 ntBASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF3Q9NR81 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.64■□□□□ 0.58
ARHGEF3Q9NR81 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF3Q9NR81 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 AC021087.4-201ENST00000563761 564 ntBASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 AC008687.5-201ENST00000593746 558 ntBASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF3Q9NR81 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 HLA-J-201ENST00000462773 1622 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 AC084018.2-201ENST00000613093 2607 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 GPX1P2-201ENST00000429271 606 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 RPS2P1-201ENST00000434010 821 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 AC113404.2-201ENST00000507884 177 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 AC009533.2-201ENST00000543664 586 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 AP001160.2-201ENST00000596071 487 ntBASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ARHGEF3Q9NR81 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms