Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 AL353801.3-201ENST00000609898 542 ntBASIC15.45■□□□□ 0.06
CDH20Q9HBT6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AL845331.1-201ENST00000424978 1190 ntBASIC15.44■□□□□ 0.06
CDH20Q9HBT6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 MIR3652-201ENST00000579335 131 ntBASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH20Q9HBT6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 NSUN5P1-202ENST00000421140 1535 ntBASIC15.43■□□□□ 0.06
CDH20Q9HBT6 NSUN5P2-203ENST00000457352 1529 ntBASIC15.43■□□□□ 0.06
CDH20Q9HBT6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 DDX43P3-201ENST00000441064 443 ntBASIC15.43■□□□□ 0.06
CDH20Q9HBT6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 AC009533.2-201ENST00000543664 586 ntBASIC15.43■□□□□ 0.06
CDH20Q9HBT6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 AC099336.1-202ENST00000602961 463 ntBASIC15.43■□□□□ 0.06
CDH20Q9HBT6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms