Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AL845331.1-201ENST00000424978 1190 ntBASIC16.86■□□□□ 0.29
BRF2Q9HAW0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AC005336.2-201ENST00000593183 939 ntBASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AL121672.3-201ENST00000608644 468 ntBASIC16.86■□□□□ 0.29
BRF2Q9HAW0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 AC005332.1-201ENST00000577698 1310 ntBASIC16.86■□□□□ 0.29
BRF2Q9HAW0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRF2Q9HAW0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.85■□□□□ 0.29
BRF2Q9HAW0 AP001094.4-201ENST00000579008 2176 ntBASIC16.85■□□□□ 0.29
BRF2Q9HAW0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 BX276092.5-203ENST00000456199 560 ntBASIC16.85■□□□□ 0.29
BRF2Q9HAW0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
BRF2Q9HAW0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 CHCHD2P8-201ENST00000429873 447 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 AC103564.2-201ENST00000432853 1299 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 FAM210CP-201ENST00000445714 574 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 VENTXP7-201ENST00000475503 772 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 FAM86EP-206ENST00000510506 987 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 IGHV3-52-201ENST00000519770 353 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms