Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 AL603756.1-201ENST00000606511 2163 ntBASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP3-1Q9BYR8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 PRORSD1P-201ENST00000295112 541 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 FITM1-202ENST00000559294 800 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC008687.5-201ENST00000593746 558 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 Z99916.2-201ENST00000604037 246 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ITM2C-210ENST00000620962 501 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC116562.4-202ENST00000641738 218 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AL162727.3-201ENST00000635661 2787 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 LINC01311-201ENST00000565162 1445 ntBASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
KRTAP3-1Q9BYR8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 HES2-202ENST00000377836 507 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 KRT18P65-201ENST00000439811 1286 ntBASIC8.95□□□□□ -0.98
KRTAP3-1Q9BYR8 AC009947.2-201ENST00000444014 672 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms