Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.86■□□□□ 0.29
NDC1Q9BTX1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 FAM197Y8-203ENST00000450145 560 ntBASIC16.86■□□□□ 0.29
NDC1Q9BTX1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 AC106795.1-205ENST00000512851 1056 ntBASIC16.86■□□□□ 0.29
NDC1Q9BTX1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 AP001269.4-201ENST00000609611 512 ntBASIC16.86■□□□□ 0.29
NDC1Q9BTX1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDC1Q9BTX1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AC010460.3-201ENST00000511359 1579 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AF186996.4-201ENST00000467186 377 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AC122714.2-201ENST00000502787 707 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 AP005117.1-201ENST00000584346 1413 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 LTB4R2-202ENST00000528054 3092 ntBASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDC1Q9BTX1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 AC103564.2-201ENST00000432853 1299 ntBASIC16.84■□□□□ 0.29
NDC1Q9BTX1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 AC073648.2-201ENST00000510116 352 ntBASIC16.84■□□□□ 0.29
NDC1Q9BTX1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms