Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 MIR6775-201ENST00000617557 69 ntBASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 AL161645.1-201ENST00000622716 1255 ntBASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 MYLKP1-201ENST00000509077 1580 ntBASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN3Q9BTN0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 AC073314.1-201ENST00000568729 2216 ntBASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 AC234783.1-201ENST00000441761 496 ntBASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 AC244093.1-201ENST00000610837 814 ntBASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 AL645728.2-201ENST00000641974 660 ntBASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN3Q9BTN0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 AL137060.1-201ENST00000618151 2648 ntBASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 BNIP3P42-201ENST00000454982 569 ntBASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 RHOQP1-201ENST00000555758 579 ntBASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 BNIP3P29-201ENST00000598302 571 ntBASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 AC011447.5-201ENST00000616168 564 ntBASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN3Q9BTN0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 MYCLP1-201ENST00000372451 1075 ntBASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 AC009477.1-201ENST00000452936 217 ntBASIC17.4■□□□□ 0.38
LRFN3Q9BTN0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms